Importing datasets

Importing a dataset source does not happen automatically, and has to be initiated by the user. After installation, a number of sample dataset sources are copied into the source data folder, and are ready to be imported.

  • Start the Panoptes app in a browser.
  • In the intro screen, click on the hyperlink “Open admin page”. This creates a new tab in the browser, showing the administration section of the app.
  • The administration section shows the available source data file sets as a tree. Click on the cog wheel icon (buttonrun) on the left of the dataset you want to import (e.g. “Samples_and_Variants”). An Import dialog box appears.
  • Check the option “Full import”.
  • Click the button “Import”.
  • This initiates the data import. A progress box is shown during this action.
  • Upon completion, a new item appears in the list “Server calculations”. Clicking on this shows a log of the import activities. If an error occurred, this can be useful for troubleshooting.
  • Go back to the browser tab with the Panoptes intro screen, and reload the app by clicking the browser refresh button to retrieve the updated dataset information.
  • The imported dataset should appear in the list.

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